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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015826087.1_cds_XP_016502554.1_16183
CDS Infomation

[gene=LOC107820731] [db_xref=GeneID:107820731] [protein=RHOMBOID-like protein 9, chloroplastic isoform X3] [protein_id=XP_016502554.1] [location=complement(join(1436..1490,1581..1726,1906..2076,2564..2729,2838..3021,3114..3459))] [gbkey=CDS]
Sequence

ATGGTCTGCACTAATGTACTAATGGGAAGAATTCATCACAATGGATGCATCTCACAGCTG
GTTGTGCCTAAAATAAGTCATGTATATAAGGAGAATAAAAGAATGCACCTCTTCGTATCC
CGGCTTTCACATAGTACTCAGAGAAGTATATTTGGGACAGTGAAATCTGCATTGAACAGT
CAGGAGAAGCAACTGAGAGCCTTAGATTCTTACTTCAAGAAGCTCCATAATAGCACAGGA
GCTTCATCTTCGAATGAGATAGAAGAACTAACTGGAAAAAAGCATCAACTTAAAGCAGAG
AAGTCACTGAAATCTTTAAATGATTTTAGTGGAAAAGCCAATGGAGGTGCAGAGTCAAAA
TTGCATGCTCTTTCTGCTTCTGATGATGACGAAACATTTGAAGAAGCATCATATTTTTCC
ATGAAAATGATCAACAGTGGTGGCAGGGCTAAGAAACTAAAACAGTACATGAAGTTAAAA
GCTAAGGACATTGACAGTTCTAACCAAGAATCATCTCGTTTTTACTTTATAGGAATACTG
GCTTCTATAAACATTGCAGTTTTCCTCTTCGAAACAGCTAGTCCAGTCAGGAACTCTGAA
ATAGGGATGCTTTCACTTCCAATGGTATATGGTGCGAAGATAAATCATTTGATCCTACTT
GGTGAATGGTGGAGACTTCTGACACCAATGTTTCTGCACTCAGGAGTCCTTCACATAGCC
CTTGGTTGTTGGGTGCTTCTTAGTTTTGGGCCTCAAGTATGTAAAGCATACGGTTCATTT
GCATTTTTCCTGATATATATTCTTGGAGGTATTTCTGGTAACCTCATCAGCTTTCTTCAC
ACCCCAGAGCCAACTGTTGGAGGAACTGGACCTGGTTTTGCCCTAATAGGAGCATGGCTC
ATTTATCAAGTTCGTAACAAAGACATGCTAGGAAAAGAAAGCATGATTGAGAAGGCGATA
ATGGCTACTGCTTTCAGCTTTGTGCTTAGCAACTTTGGTCCCATAGATAACTGCTTTAAT
GGGAATAGCATATGGCTATCTTACATGTCCAACTCTTCAAGTGGATAA

Peptide Sequence

PEP ID

XP_016502554.1
PEP Infomation

PREDICTED: RHOMBOID-like protein 9, chloroplastic isoform X3 [Nicotiana tabacum]
Sequence

MVCTNVLMGRIHHNGCISQLVVPKISHVYKENKRMHLFVSRLSHSTQRSIFGTVKSALNS
QEKQLRALDSYFKKLHNSTGASSSNEIEELTGKKHQLKAEKSLKSLNDFSGKANGGAESK
LHALSASDDDETFEEASYFSMKMINSGGRAKKLKQYMKLKAKDIDSSNQESSRFYFIGIL
ASINIAVFLFETASPVRNSEIGMLSLPMVYGAKINHLILLGEWWRLLTPMFLHSGVLHIA
LGCWVLLSFGPQVCKAYGSFAFFLIYILGGISGNLISFLHTPEPTVGGTGPGFALIGAWL
IYQVRNKDMLGKESMIEKAIMATAFSFVLSNFGPIDNCFNGNSIWLSYMSNSSSG

Transcript Sequence

Gene sequence data has not been registered.